Aug-05-2020, 07:10 AM
Anybody familiar with WFDB application for Python?
So I'm trying to denoise MIT-BIH Arrhythmia Database (mitdb) downloaded from Physionet using median filter. Using WFDB, I can read the signal data with the following code:
I am aware that SciPy Signal has
TIA
So I'm trying to denoise MIT-BIH Arrhythmia Database (mitdb) downloaded from Physionet using median filter. Using WFDB, I can read the signal data with the following code:
record = wfdb.rdrecord('mitdb/100', sampto=3000)
ann = wfdb.rdann('mitdb/100', 'atr', sampto=3000)Then, when it comes to denoising, I read the WFDB documentation for Python and there is no such function to do median filter, unlike WFDB for Matlab which has the function medfiltI am aware that SciPy Signal has
medfilt function but if I read the signal data with WFDB, how can I input the data in the medfilt SciPy Signal function? Or should I use another method to read/open the data so I can use medfilt in SciPy? Or perhaps anybody know how to do median filtering with WFDB in Python?TIA
